HL_6CZR_183

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6CZR|1|2a|A|340

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_183 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1414

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6CZR|1|2a|C|338
6CZR|1|2a|U|339
6CZR|1|2a|A|340
6CZR|1|2a|C|341
6CZR|1|2a|G|342
6CZR|1|2a|G|343

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2O

50S ribosomal protein L14

Chain 2T

50S ribosomal protein L19