3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
6CZR|1|2a|A|1432, 6CZR|1|2a|G|1434
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6CZR_205 not in the Motif Atlas
Homologous match to HL_6CZR_102
Geometric discrepancy: 0.2667
The information below is about HL_6CZR_102
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_52463.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
1

Unit IDs

6CZR|1|2a|C|1430
6CZR|1|2a|U|1431
6CZR|1|2a|A|1432
6CZR|1|2a|C|1433
6CZR|1|2a|G|1434
6CZR|1|2a|G|1435

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

Chain 2t
30S ribosomal protein S20

Coloring options:


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