HL_6CZR_232

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

6CZR|1|1A|A|933

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_232 not in the Motif Atlas

Homologous match to HL_9DFE_024

Geometric discrepancy: 0.258

The information below is about HL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6CZR|1|1A|C|930
6CZR|1|1A|C|931
6CZR|1|1A|C|932
6CZR|1|1A|A|933
6CZR|1|1A|C|934
6CZR|1|1A|C|935
6CZR|1|1A|A|936
6CZR|1|1A|G|937

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1m

30S ribosomal protein S13

Chain 1s

30S ribosomal protein S19