HL_6CZR_238

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

6CZR|1|2a|U|209, 6CZR|1|2a|U|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_238 not in the Motif Atlas

Homologous match to HL_6CZR_234

Geometric discrepancy: 0.3742

The information below is about HL_6CZR_234

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

6CZR|1|2a|C|208
6CZR|1|2a|U|209
6CZR|1|2a|U|210
6CZR|1|2a|U|211
6CZR|1|2a|G|212

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains