HL_6D12_001

3D structure

PDB id

6D12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of C-terminal xRRM domain of human Larp7 bound to 7SK stem-loop 4 RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.2 Å

Loop

Sequence

CAUGUGG

Length

7 nucleotides

Bulged bases

6D12|1|C|G|314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.5

Basepair signature

cWW-F-F

Number of instances in this motif group

26

Unit IDs

6D12|1|C|C|309
6D12|1|C|A|310
6D12|1|C|U|311
6D12|1|C|G|312
6D12|1|C|U|313
6D12|1|C|G|314
6D12|1|C|G|315

Current chains

Chain C

human 7SK RNA stem-loop 4

Nearby chains

Chain B

La-related protein 7