HL_6D12_002

3D structure

PDB id

6D12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of C-terminal xRRM domain of human Larp7 bound to 7SK stem-loop 4 RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.2 Å

Loop

Sequence

CAUGUGG

Length

7 nucleotides

Bulged bases (A, C, G, U)

333G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_00206.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

6D12|1|C|C|328
6D12|1|C|A|329
6D12|1|C|U|330
6D12|1|C|G|331
6D12|1|C|U|332
6D12|1|C|G|333
6D12|1|C|G|334

Current chains

Chain C

human 7SK RNA stem-loop 4

Nearby chains

Chain A

La-related protein 7