HL_6DZP_040

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

UCAGUGGUAAUA

Length

12 nucleotides

Bulged bases

6DZP|1|A|G|1674, 6DZP|1|A|U|1681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|U|1671
6DZP|1|A|C|1672
6DZP|1|A|A|1673
6DZP|1|A|G|1674
6DZP|1|A|U|1675
6DZP|1|A|G|1676
6DZP|1|A|G|1677
6DZP|1|A|U|1678
6DZP|1|A|A|1679
6DZP|1|A|A|1680
6DZP|1|A|U|1681
6DZP|1|A|A|1682

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L17