HL_6EM1_047

3D structure

PDB id

6EM1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCUGAUCAGGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6EM1|1|1|G|3065
6EM1|1|1|U|3066
6EM1|1|1|C|3067
6EM1|1|1|U|3068
6EM1|1|1|G|3069
6EM1|1|1|A|3070
6EM1|1|1|U|3071
6EM1|1|1|C|3072
6EM1|1|1|A|3073
6EM1|1|1|G|3074
6EM1|1|1|G|3075
6EM1|1|1|C|3076

Current chains

Chain 1

25S ribosomal RNA

Nearby chains