HL_6ENJ_015

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6ENJ|1|A|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_015 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.1295

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6ENJ|1|A|G|410
6ENJ|1|A|G|411
6ENJ|1|A|A|412
6ENJ|1|A|C|413
6ENJ|1|A|C|414
6ENJ|1|A|A|415
6ENJ|1|A|U|416
6ENJ|1|A|C|417

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15