HL_6ENJ_061

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUGAAUGGAAGG

Length

12 nucleotides

Bulged bases

6ENJ|1|A|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_061 not in the Motif Atlas

Geometric match to HL_1J1U_002

Geometric discrepancy: 0.3603

The information below is about HL_1J1U_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

6ENJ|1|A|C|2403
6ENJ|1|A|U|2404
6ENJ|1|A|G|2405
6ENJ|1|A|A|2406
6ENJ|1|A|A|2407
6ENJ|1|A|U|2408
6ENJ|1|A|G|2409
6ENJ|1|A|G|2410
6ENJ|1|A|A|2411
6ENJ|1|A|A|2412
6ENJ|1|A|G|2413
6ENJ|1|A|G|2414

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15