HL_6ENJ_113

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCGACGGUUGUC

Length

12 nucleotides

Bulged bases

6ENJ|1|A|G|1452, 6ENJ|1|A|A|1453, 6ENJ|1|A|C|1454, 6ENJ|1|A|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_113 not in the Motif Atlas

Geometric match to HL_5J7L_200

Geometric discrepancy: 0.351

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6ENJ|1|A|G|1450
6ENJ|1|A|C|1451
6ENJ|1|A|G|1452
6ENJ|1|A|A|1453
6ENJ|1|A|C|1454
6ENJ|1|A|G|1455
6ENJ|1|A|G|1456
6ENJ|1|A|U|1457
6ENJ|1|A|U|1458
6ENJ|1|A|G|1459
6ENJ|1|A|U|1460
6ENJ|1|A|C|1461

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17