HL_6ENJ_115
3D structure
- PDB id
- 6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGCAAUGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ENJ_115 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.2819
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_86621.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6ENJ|1|A|G|2323
6ENJ|1|A|U|2324
6ENJ|1|A|G|2325
6ENJ|1|A|C|2326
6ENJ|1|A|A|2327
6ENJ|1|A|A|2328
6ENJ|1|A|U|2329
6ENJ|1|A|G|2330
6ENJ|1|A|G|2331
6ENJ|1|A|C|2332
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
- Chain x
- Transfer RNA; tRNA
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