3D structure

PDB id
6FQ3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Danio rerio Lin41 filamin-NHL domains in complex with lin-29A 5'UTR 13mer RNA
Experimental method
X-RAY DIFFRACTION
Resolution
1.9 Å

Loop

Sequence
UCCAA
Length
5 nucleotides
Bulged bases
6FQ3|1|B|C|6
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_86735.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
6

Unit IDs

6FQ3|1|B|U|5
6FQ3|1|B|C|6
6FQ3|1|B|C|7
6FQ3|1|B|A|8
6FQ3|1|B|A|9

Current chains

Chain B
RNA (5'-R(*GP*GP*AP*GP*UP*CP*CP*AP*AP*CP*UP*CP*C)-3')

Nearby chains

Chain A
E3 ubiquitin-protein ligase TRIM71

Coloring options:

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