HL_6FT6_014
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 6FT6|1|1|A|645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FT6_014 not in the Motif Atlas
- Geometric match to HL_7VTI_001
- Geometric discrepancy: 0.2727
- The information below is about HL_7VTI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.6
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
6FT6|1|1|U|640
6FT6|1|1|C|641
6FT6|1|1|U|642
6FT6|1|1|U|643
6FT6|1|1|G|644
6FT6|1|1|A|645
6FT6|1|1|A|646
6FT6|1|1|A|647
6FT6|1|1|C|648
6FT6|1|1|A|649
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain e
- 60S ribosomal protein L32
- Chain m
- Nucleolar GTP-binding protein 2
- Chain s
- Nuclear GTP-binding protein NUG1
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