HL_6FT6_052

3D structure

PDB id

6FT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AGACAUAGUUU

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FT6|1|1|A|2441
6FT6|1|1|G|2442
6FT6|1|1|A|2443
6FT6|1|1|C|2444
6FT6|1|1|A|2445
6FT6|1|1|U|2501
6FT6|1|1|A|2502
6FT6|1|1|G|2503
6FT6|1|1|U|2504
6FT6|1|1|U|2505
6FT6|1|1|U|2506

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain G

60S ribosomal protein L8-A

Chain MM

ATP-dependent RNA helicase DOB1

Chain i

60S ribosomal protein L36-A