HL_6FTJ_015

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|U|1364
6FTJ|1|u|C|1365
6FTJ|1|u|G|1366
6FTJ|1|u|C|1367
6FTJ|1|u|A|1368
6FTJ|1|u|C|1369
6FTJ|1|u|G|1370
6FTJ|1|u|A|1371
6FTJ|1|u|A|1372
6FTJ|1|u|A|1373

Current chains

Chain u

28S rRNA

Nearby chains

Chain C

Ribosomal protein L4

Chain L

eL13

Chain N

Ribosomal protein L15

Chain Y

Ribosomal protein L26

Chain w

5.8S ribosomal RNA; 5.8S rRNA