HL_6FTJ_025

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGCUGGCGUG

Length

10 nucleotides

Bulged bases

6FTJ|1|u|G|1815

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|C|1814
6FTJ|1|u|G|1815
6FTJ|1|u|C|1816
6FTJ|1|u|U|1817
6FTJ|1|u|G|1818
6FTJ|1|u|G|1819
6FTJ|1|u|C|1820
6FTJ|1|u|G|1821
6FTJ|1|u|U|1822
6FTJ|1|u|G|1823

Current chains

Chain u

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L5

Chain T

eL21

Chain b

60S ribosomal protein L29