HL_6FTJ_070

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGAGAGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FTJ_070 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1256

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6FTJ|1|u|G|4907
6FTJ|1|u|G|4908
6FTJ|1|u|A|4909
6FTJ|1|u|G|4910
6FTJ|1|u|A|4911
6FTJ|1|u|G|4912
6FTJ|1|u|G|4913
6FTJ|1|u|C|4914

Current chains

Chain u

28S rRNA

Nearby chains

Chain B

uL3

Chain O

uL13