HL_6FTJ_078

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|w|G|121
6FTJ|1|w|G|122
6FTJ|1|w|U|123
6FTJ|1|w|U|124
6FTJ|1|w|C|125
6FTJ|1|w|C|126
6FTJ|1|w|U|127
6FTJ|1|w|C|128
6FTJ|1|w|C|129

Current chains

Chain w

5.8S ribosomal RNA

Nearby chains

Chain X

uL23

Chain u

Large subunit ribosomal RNA; LSU rRNA