HL_6FYY_019

3D structure

PDB id

6FYY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CUCCUUGUGGG

Length

11 nucleotides

Bulged bases

6FYY|1|2|U|718, 6FYY|1|2|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FYY|1|2|C|714
6FYY|1|2|U|715
6FYY|1|2|C|716
6FYY|1|2|C|717
6FYY|1|2|U|718
6FYY|1|2|U|719
6FYY|1|2|G|720
6FYY|1|2|U|721
6FYY|1|2|G|722
6FYY|1|2|G|723
6FYY|1|2|G|724

Current chains

Chain 2

18S ribosomal RNA

Nearby chains