HL_6GAW_032
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAGAAC
- Length
- 6 nucleotides
- Bulged bases
- 6GAW|1|BA|G|222
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GAW_032 not in the Motif Atlas
- Geometric match to HL_7RQB_011
- Geometric discrepancy: 0.1815
- The information below is about HL_7RQB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70546.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
6GAW|1|BA|G|220
6GAW|1|BA|A|221
6GAW|1|BA|G|222
6GAW|1|BA|A|223
6GAW|1|BA|A|224
6GAW|1|BA|C|225
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BP
- 39S ribosomal protein L15, mitochondrial
- Chain Bl
- 39S ribosomal protein L49, mitochondrial
- Chain Bn
- Mitochondrial ribosomal protein L51
- Chain Bv
- mL64
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