HL_6GAW_036

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUUAG

Length

6 nucleotides

Bulged bases

6GAW|1|BA|U|373, 6GAW|1|BA|A|376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GAW_036 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.1462

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.2

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

6GAW|1|BA|U|372
6GAW|1|BA|U|373
6GAW|1|BA|U|374
6GAW|1|BA|U|375
6GAW|1|BA|A|376
6GAW|1|BA|G|377

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain BP

39S ribosomal protein L15, mitochondrial