HL_6GAW_055

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUACAAAAAACCC

Length

13 nucleotides

Bulged bases

6GAW|1|BA|C|1167, 6GAW|1|BA|A|1168, 6GAW|1|BA|C|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|BA|G|1164
6GAW|1|BA|U|1165
6GAW|1|BA|A|1166
6GAW|1|BA|C|1167
6GAW|1|BA|A|1168
6GAW|1|BA|A|1169
6GAW|1|BA|A|1170
6GAW|1|BA|A|1171
6GAW|1|BA|A|1172
6GAW|1|BA|A|1173
6GAW|1|BA|C|1174
6GAW|1|BA|C|1175
6GAW|1|BA|C|1176

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain B0

Mitochondrial ribosomal protein L27

Chain B3

uL30m

Chain BQ

39S ribosomal protein L16, mitochondrial

Chain Bb

Mitochondrial ribosomal protein L38

Chain Bk

Mitochondrial ribosomal protein L48