HL_6GAW_056

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GAW_056 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1921

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

6GAW|1|BA|U|1187
6GAW|1|BA|U|1188
6GAW|1|BA|U|1189
6GAW|1|BA|A|1190

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain B6

bL33m

Chain B8

Mitochondrial ribosomal protein L35

Chain Bv

mL64