HL_6GAW_057
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAACCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GAW_057 not in the Motif Atlas
- Geometric match to HL_4WF9_053
- Geometric discrepancy: 0.1205
- The information below is about HL_4WF9_053
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_87268.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
6GAW|1|BA|C|1198
6GAW|1|BA|A|1199
6GAW|1|BA|A|1200
6GAW|1|BA|A|1201
6GAW|1|BA|C|1202
6GAW|1|BA|C|1203
6GAW|1|BA|A|1204
6GAW|1|BA|G|1205
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BP
- 39S ribosomal protein L15, mitochondrial
- Chain Bb
- Mitochondrial ribosomal protein L38
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