HL_6GAW_069

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GAW_069 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2631

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.2

Basepair signature

cWW-cWW

Number of instances in this motif group

3

Unit IDs

6GAW|1|BB|C|52
6GAW|1|BB|C|53
6GAW|1|BB|U|54
6GAW|1|BB|C|55
6GAW|1|BB|A|58
6GAW|1|BB|G|59

Current chains

Chain BB

tRNA-Phe, mitochondrial

Nearby chains

Chain Bb

Mitochondrial ribosomal protein L38