HL_6GBZ_025

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUCAUCCCGACU

Length

13 nucleotides

Bulged bases

6GBZ|1|A|U|887, 6GBZ|1|A|C|890

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|882
6GBZ|1|A|G|883
6GBZ|1|A|U|884
6GBZ|1|A|C|885
6GBZ|1|A|A|886
6GBZ|1|A|U|887
6GBZ|1|A|C|888
6GBZ|1|A|C|889
6GBZ|1|A|C|890
6GBZ|1|A|G|891
6GBZ|1|A|A|892
6GBZ|1|A|C|893
6GBZ|1|A|U|894

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5