HL_6GBZ_030

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

6GBZ|1|A|U|1174, 6GBZ|1|A|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|1168
6GBZ|1|A|A|1169
6GBZ|1|A|C|1170
6GBZ|1|A|G|1171
6GBZ|1|A|C|1172
6GBZ|1|A|U|1173
6GBZ|1|A|U|1174
6GBZ|1|A|A|1175
6GBZ|1|A|U|1176
6GBZ|1|A|G|1177
6GBZ|1|A|C|1178
6GBZ|1|A|G|1179
6GBZ|1|A|U|1180
6GBZ|1|A|U|1181

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain R

50S ribosomal protein L21