HL_6GBZ_070

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAACUGAAACAUCUAAGUAC

Length

21 nucleotides

Bulged bases

6GBZ|1|A|A|196, 6GBZ|1|A|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|188
6GBZ|1|A|G|189
6GBZ|1|A|A|190
6GBZ|1|A|A|191
6GBZ|1|A|C|192
6GBZ|1|A|U|193
6GBZ|1|A|G|194
6GBZ|1|A|A|195
6GBZ|1|A|A|196
6GBZ|1|A|A|197
6GBZ|1|A|C|198
6GBZ|1|A|A|199
6GBZ|1|A|U|200
6GBZ|1|A|C|201
6GBZ|1|A|U|202
6GBZ|1|A|A|203
6GBZ|1|A|A|204
6GBZ|1|A|G|205
6GBZ|1|A|U|206
6GBZ|1|A|A|207
6GBZ|1|A|C|208

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28