HL_6GC4_025

3D structure

PDB id

6GC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 3

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GGUCAUCCCGACU

Length

13 nucleotides

Bulged bases

6GC4|1|A|A|886, 6GC4|1|A|U|887, 6GC4|1|A|C|888, 6GC4|1|A|C|889, 6GC4|1|A|C|890, 6GC4|1|A|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC4|1|A|G|882
6GC4|1|A|G|883
6GC4|1|A|U|884
6GC4|1|A|C|885
6GC4|1|A|A|886
6GC4|1|A|U|887
6GC4|1|A|C|888
6GC4|1|A|C|889
6GC4|1|A|C|890
6GC4|1|A|G|891
6GC4|1|A|A|892
6GC4|1|A|C|893
6GC4|1|A|U|894

Current chains

Chain A

23S ribosomal RNA

Nearby chains