HL_6GC4_058
3D structure
- PDB id
- 6GC4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- AUGCCAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GC4_058 not in the Motif Atlas
- Geometric match to HL_3R4F_002
- Geometric discrepancy: 0.3446
- The information below is about HL_3R4F_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38592.1
- Basepair signature
- cWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6GC4|1|A|A|2700
6GC4|1|A|U|2701
6GC4|1|A|G|2702
6GC4|1|A|C|2703
6GC4|1|A|C|2704
6GC4|1|A|A|2705
6GC4|1|A|A|2706
6GC4|1|A|U|2707
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L17
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