HL_6GC7_022

3D structure

PDB id

6GC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

6GC7|1|A|U|827, 6GC7|1|A|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GC7_022 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.1798

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

6GC7|1|A|U|826
6GC7|1|A|U|827
6GC7|1|A|U|828
6GC7|1|A|A|829
6GC7|1|A|G|830
6GC7|1|A|G|831

Current chains

Chain A

23S ribosomal RNA

Nearby chains