HL_6GC7_043

3D structure

PDB id

6GC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GAAAUCC

Length

7 nucleotides

Bulged bases

6GC7|1|A|A|2060

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GC7_043 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.3404

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6GC7|1|A|G|2057
6GC7|1|A|A|2058
6GC7|1|A|A|2059
6GC7|1|A|A|2060
6GC7|1|A|U|2609
6GC7|1|A|C|2610
6GC7|1|A|C|2611

Current chains

Chain A

23S ribosomal RNA

Nearby chains