HL_6GC8_058
3D structure
- PDB id
- 6GC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate - 50S rec*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GC8_058 not in the Motif Atlas
- Homologous match to HL_4WF9_054
- Geometric discrepancy: 0.1201
- The information below is about HL_4WF9_054
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6GC8|1|A|C|2374
6GC8|1|A|G|2375
6GC8|1|A|A|2376
6GC8|1|A|A|2377
6GC8|1|A|A|2378
6GC8|1|A|G|2379
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain O
- 50S ribosomal protein L18
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