HL_6GQ1_089

3D structure

PDB id

6GQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GCCGGUCGGAUUUC

Length

14 nucleotides

Bulged bases

6GQ1|1|2|C|653, 6GQ1|1|2|U|657

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GQ1|1|2|G|652
6GQ1|1|2|C|653
6GQ1|1|2|C|654
6GQ1|1|2|G|655
6GQ1|1|2|G|656
6GQ1|1|2|U|657
6GQ1|1|2|C|658
6GQ1|1|2|G|676
6GQ1|1|2|G|677
6GQ1|1|2|A|678
6GQ1|1|2|U|679
6GQ1|1|2|U|680
6GQ1|1|2|U|681
6GQ1|1|2|C|682

Current chains

Chain 2

18S ribosomal RNA

Nearby chains