HL_6GQV_024
3D structure
- PDB id
- 6GQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUCCGGGGUCGAAAUGACCUUGA
- Length
- 23 nucleotides
- Bulged bases
- 6GQV|1|1|G|1018, 6GQV|1|1|U|1028
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GQV|1|1|U|1014
6GQV|1|1|U|1015
6GQV|1|1|C|1016
6GQV|1|1|C|1017
6GQV|1|1|G|1018
6GQV|1|1|G|1019
6GQV|1|1|G|1020
6GQV|1|1|G|1021
6GQV|1|1|U|1022
6GQV|1|1|C|1023
6GQV|1|1|G|1024
6GQV|1|1|A|1025
6GQV|1|1|A|1026
6GQV|1|1|A|1027
6GQV|1|1|U|1028
6GQV|1|1|G|1029
6GQV|1|1|A|1030
6GQV|1|1|C|1031
6GQV|1|1|C|1032
6GQV|1|1|U|1033
6GQV|1|1|U|1034
6GQV|1|1|G|1035
6GQV|1|1|A|1036
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
Coloring options: