HL_6GSJ_008
3D structure
- PDB id
- 6GSJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- CACUGAGACACGGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GSJ_008 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.0929
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6GSJ|1|13|C|320
6GSJ|1|13|A|321
6GSJ|1|13|C|322
6GSJ|1|13|U|323
6GSJ|1|13|G|324
6GSJ|1|13|A|325
6GSJ|1|13|G|326
6GSJ|1|13|A|327
6GSJ|1|13|C|328
6GSJ|1|13|A|329
6GSJ|1|13|C|330
6GSJ|1|13|G|331
6GSJ|1|13|G|332
6GSJ|1|13|G|333
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 7I
- 30S ribosomal protein S16
- Chain BI
- 30S ribosomal protein S20
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