HL_6GSJ_158

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GGCAGCCUC

Length

9 nucleotides

Bulged bases

6GSJ|1|1H|G|892

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|1H|G|879
6GSJ|1|1H|G|880
6GSJ|1|1H|C|889
6GSJ|1|1H|A|890
6GSJ|1|1H|G|892
6GSJ|1|1H|C|893
6GSJ|1|1H|C|894
6GSJ|1|1H|U|895
6GSJ|1|1H|C|898

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 1K

Transfer RNA; tRNA

Chain 4I

30S ribosomal protein S13

Chain H8

50S ribosomal protein L25