HL_6GSK_183

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

CCCGCCUCCGGGUGGG

Length

16 nucleotides

Bulged bases

6GSK|1|1H|G|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|1H|C|2138
6GSK|1|1H|C|2139
6GSK|1|1H|C|2140
6GSK|1|1H|G|2141
6GSK|1|1H|C|2142
6GSK|1|1H|C|2143
6GSK|1|1H|U|2144
6GSK|1|1H|C|2145
6GSK|1|1H|C|2146
6GSK|1|1H|G|2147
6GSK|1|1H|G|2148
6GSK|1|1H|G|2149
6GSK|1|1H|U|2150
6GSK|1|1H|G|2151
6GSK|1|1H|G|2152
6GSK|1|1H|G|2153

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 2I

30S ribosomal protein S11