HL_6GSK_220
3D structure
- PDB id
- 6GSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- CCCCUUGGGG
- Length
- 10 nucleotides
- Bulged bases
- 6GSK|1|13|U|188, 6GSK|1|13|U|189, 6GSK|1|13|G|190
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GSK|1|13|C|186|||D
6GSK|1|13|C|186|||E
6GSK|1|13|C|186|||F
6GSK|1|13|C|187
6GSK|1|13|U|188
6GSK|1|13|U|189
6GSK|1|13|G|190
6GSK|1|13|G|191|||A
6GSK|1|13|G|191|||B
6GSK|1|13|G|191|||C
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 8I
- 30S ribosomal protein S17
- Chain BI
- 30S ribosomal protein S20
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