HL_6GSK_231
3D structure
- PDB id
- 6GSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- GCAG(5MU)(PSU)CGACUCUGC
- Length
- 15 nucleotides
- Bulged bases
- 6GSK|1|1L|C|56, 6GSK|1|1L|G|57
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GSK|1|1L|G|50
6GSK|1|1L|C|51
6GSK|1|1L|A|52
6GSK|1|1L|G|53
6GSK|1|1L|5MU|54
6GSK|1|1L|PSU|55
6GSK|1|1L|C|56
6GSK|1|1L|G|57
6GSK|1|1L|A|58
6GSK|1|1L|C|59
6GSK|1|1L|U|60
6GSK|1|1L|C|61
6GSK|1|1L|U|62
6GSK|1|1L|G|63
6GSK|1|1L|C|64
Current chains
- Chain 1L
- tRNAThr
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 45
- 50S ribosomal protein L16
- Chain D5
- 50S ribosomal protein L25
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