3D structure

PDB id
6GSL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.16 Å

Loop

Sequence
GGAAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6GSL_051 not in the Motif Atlas
Homologous match to HL_7RQB_020
Geometric discrepancy: 0.102
The information below is about HL_7RQB_020
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

6GSL|1|14|G|629
6GSL|1|14|G|630
6GSL|1|14|A|631
6GSL|1|14|A|632
6GSL|1|14|A|633
6GSL|1|14|C|634

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 35
50S ribosomal protein L15
Chain M5
50S ribosomal protein L35

Coloring options:


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