HL_6GSL_070

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

CGUACG

Length

6 nucleotides

Bulged bases

6GSL|1|14|G|1534

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GSL_070 not in the Motif Atlas

Geometric match to HL_1GID_008

Geometric discrepancy: 0.378

The information below is about HL_1GID_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50621.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

6GSL|1|14|C|1533
6GSL|1|14|G|1534
6GSL|1|14|U|1535
6GSL|1|14|A|1536
6GSL|1|14|C|1537
6GSL|1|14|G|1538

Current chains

Chain 14

23S ribosomal RNA

Nearby chains