HL_6GSL_147

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

6GSL|1|1H|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GSL_147 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.101

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

6GSL|1|1H|G|410
6GSL|1|1H|G|411
6GSL|1|1H|A|412
6GSL|1|1H|C|413
6GSL|1|1H|C|414
6GSL|1|1H|A|415
6GSL|1|1H|C|416
6GSL|1|1H|C|417

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 78

50S ribosomal protein L15

Chain J8

50S ribosomal protein L28