HL_6GSL_233

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

AGUUGCCAGCGGUUCGGCCGGGCACUCU

Length

28 nucleotides

Bulged bases

6GSL|1|1G|G|1127, 6GSL|1|1G|U|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSL|1|1G|A|1123
6GSL|1|1G|G|1124
6GSL|1|1G|U|1125
6GSL|1|1G|U|1126
6GSL|1|1G|G|1127
6GSL|1|1G|C|1128
6GSL|1|1G|C|1129
6GSL|1|1G|A|1130
6GSL|1|1G|G|1131
6GSL|1|1G|C|1132
6GSL|1|1G|G|1133
6GSL|1|1G|G|1134
6GSL|1|1G|U|1135
6GSL|1|1G|U|1136
6GSL|1|1G|C|1137
6GSL|1|1G|G|1138
6GSL|1|1G|G|1139
6GSL|1|1G|C|1140
6GSL|1|1G|C|1141
6GSL|1|1G|G|1142
6GSL|1|1G|G|1143
6GSL|1|1G|G|1144
6GSL|1|1G|C|1145
6GSL|1|1G|A|1146
6GSL|1|1G|C|1147
6GSL|1|1G|U|1148
6GSL|1|1G|C|1149
6GSL|1|1G|U|1150

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1A

30S ribosomal protein S10

Chain 82

30S ribosomal protein S9