HL_6GSL_234
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CCGGCAACGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GSL_234 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.2823
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6GSL|1|1G|C|1263
6GSL|1|1G|C|1264
6GSL|1|1G|G|1265
6GSL|1|1G|G|1266
6GSL|1|1G|C|1267
6GSL|1|1G|A|1268
6GSL|1|1G|A|1269
6GSL|1|1G|C|1270
6GSL|1|1G|G|1271
6GSL|1|1G|G|1272
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1B
- 30S ribosomal protein Thx
- Chain 4A
- 30S ribosomal protein S13
- Chain AA
- 30S ribosomal protein S19
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