HL_6GWT_025

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GWT_025 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3032

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

6GWT|1|A|G|882
6GWT|1|A|G|883
6GWT|1|A|U|884
6GWT|1|A|A|892
6GWT|1|A|C|893
6GWT|1|A|U|894

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13