HL_6GXP_029

3D structure

PDB id

6GXP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

6GXP|1|A|A|1175, 6GXP|1|A|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXP|1|A|C|1167
6GXP|1|A|G|1168
6GXP|1|A|A|1169
6GXP|1|A|C|1170
6GXP|1|A|G|1171
6GXP|1|A|C|1172
6GXP|1|A|U|1173
6GXP|1|A|U|1174
6GXP|1|A|A|1175
6GXP|1|A|U|1176
6GXP|1|A|G|1177
6GXP|1|A|C|1178
6GXP|1|A|G|1179
6GXP|1|A|U|1180
6GXP|1|A|U|1181
6GXP|1|A|G|1182

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L21

Chain Z

50S ribosomal protein L30