HL_6GZ3_052

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGUAACUAUGACU

Length

13 nucleotides

Bulged bases

6GZ3|1|A2|A|3731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|A|3727
6GZ3|1|A2|G|3728
6GZ3|1|A2|U|3729
6GZ3|1|A2|A|3730
6GZ3|1|A2|A|3731
6GZ3|1|A2|C|3732
6GZ3|1|A2|U|3733
6GZ3|1|A2|A|3734
6GZ3|1|A2|U|3735
6GZ3|1|A2|G|3736
6GZ3|1|A2|A|3737
6GZ3|1|A2|C|3738
6GZ3|1|A2|U|3739

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B1

Small subunit ribosomal RNA; SSU rRNA

Chain Bv

Transfer RNA; tRNA

Chain Ct

eukaryotic elongation factor 2 (eEF2)