HL_6GZ3_098

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

6GZ3|1|B1|G|836, 6GZ3|1|B1|C|840

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|B1|C|833
6GZ3|1|B1|C|834
6GZ3|1|B1|C|835
6GZ3|1|B1|G|836
6GZ3|1|B1|A|837
6GZ3|1|B1|G|838
6GZ3|1|B1|C|839
6GZ3|1|B1|C|840
6GZ3|1|B1|G|841

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BE

ribosomal protein eS4

Chain BJ

Ribosomal protein S9 (Predicted)

Chain BY

ribosomal protein eS24